15 Best Hotels in Isabela, Galapagos
João Petersen · Last updated September 2, 2026

Isabela is the largest island in the Galapagos, with an area of 4,586 square kilometers, more than four times the size of Santa Cruz, the second largest. This list of 15 hotels follows the format of my earlier list of the top hotels in Santa Cruz. I picked them by location, what each property offers and guest ratings. Cormorant Beach House is the one I stayed at, and the rest come from research, not from stays of my own.
The list is split into villas and boutique hotels, comfort and standard hotels, and budget hotels, with a price comparison for two people in US dollars. Prices change with the season, so check current rates before you book.
Some of the booking links on this page are affiliate links; I may earn a commission at no extra cost to you.
Your Galapagos Islands Essentials - Quick Guide
Short on time? This quick Galapagos guide will help you plan.


Where to Stay:
- – Finch Bay Galapagos Hotel (Santa Cruz Island)
- – Golden Bay Galapagos Hotel (San Cristobal Island)
- – Hotel Iguana Crossing (Isabela Island)
Must-Do Experiences:
- – 360 Tour (San Cristobal highlights by boat)
- – Kicker Rock Tour (Full-day snorkeling tour to Kicker Rock)
- – Bartolome Island Tour (Iconic views and marine life)
- – Floreana Island Tour (Snorkel, fishing and history)
- – Sierra Negra Volcano Tour (Half-day guided hike on Isabela Island)
- – Los Tuneles Tour (Snorkeling tour on Isabela Island)
The links in this box are affiliate links.
Tours sell out fast. Book early and plan a backup day.
Plan Your Galapagos Trip (Free Quote)
Want help organizing this trip? I recommend Happy Gringo, a travel agency in Ecuador. You can ask them for a free quote.
Get Free QuoteOur Favourite Stays
If you are short on time, these three cover the tiers: Iguana Crossing Boutique Hotel (boutique), Cormorant Beach House (comfort) and Casa Soleil (budget). Cormorant Beach House is the one I stayed at, and the other two come from research. The full list, with prices, is further down.
Iguana Crossing Boutique Hotel
(Boutique Hotel)
- Beachfront Luxury
- Rooftop Lounge & Pool
- Oceanview Dining
Iguana Crossing Boutique Hotel is in Puerto Villamil, across the street from the beach and close to the town center. It has 14 rooms, a pool and a rooftop lounge, and it uses materials from the island. The rooms are mostly white with dark furniture, and have flat-screen TVs, air conditioning, stocked minibars and plenty of storage.
The listing mentions iguanas crossing the road in front of the hotel. Most of the staff are locals and can help with excursions and massages. There is a restaurant, an ocean-view bar and an outdoor jacuzzi. At 351$ for two it is the cheapest of the four villas and boutique hotels here, with an 8.8 rating, the lowest of the four.
Cormorant Beach House
(Comfort Hotel)
- Eco-Friendly Retreat
- Tranquil Beachfront
- Local Breakfast
I stayed at Cormorant Beach House. It has 10 rooms on the Puerto Villamil coast, by a white sand beach.
Its listing describes a minimalist, ecological hotel that has been running for over 20 years. Breakfast is at a local-owned restaurant near the hotel, and the staff can help plan activities. At 159$ for two it is rated 9.4, the same as The Isabela Beach House, which costs 8$ more.
Book at Expedia Book at Booking.com
Apartahotel Casa Soleil
(Budget Hotel)
- Spacious Apartments
- In-Room Kitchen
- Patio & Terrace
Casa Soleil Aparthotel is in Puerto Villamil, about 450 meters from the beach. It has fully equipped one- and two-bedroom apartments, each with a kitchen, a living room, a patio and a terrace.
Options are the Deluxe Apartment, the Superior Apartment and a 2-Bedroom Apartment for up to 5 guests, all with a kitchen with a toaster, a dining area, a flat-screen TV and a private bathroom with free toiletries. At 58$ for two it is the most expensive of the budget hotels here, rated 8.9.
Book at Expedia Book at Booking.com
Where to stay on Isabela Island
Most hotels on Isabela are in or near Puerto Villamil town, and there are two main areas to choose from.
The beachfront has direct access to the long white sand beach that runs in front of the town. Prices are usually higher here.
A block or two back from the beach, in Puerto Villamil town, there are more budget-friendly options. You are still close to the beach and to the town’s shops and restaurants.
What to do on Isabela Island
I have guides to the island’s activities, including free things to do, tours, snorkeling spots, dive sites and beaches:
11 Free Things to do in Isabela, 5 Amazing Tours in Isabela, 7 Best Snorkeling Spots in Isabela, 5 Best Dive Sites in Isabela, 19 Awesome Things to do in Isabela, 3 Best Beaches in Isabela
All-Inclusive Experiences
Scalesia Lodge
(Luxury Galapagos Camping)
Scalesia Lodge is an eco-lodge with 16 safari-style tents in the highlands of Isabela, about 20 minutes from Puerto Villamil. The tents have en-suite bathrooms and island views, families are welcome, and meals use locally sourced ingredients.
Activities include tours to see giant tortoises and hiking the active volcanoes of Sierra Negra and Chico. Scalesia Lodge is not on the booking sites above, so use the contact links below to reserve.
For reservations contact them here:

Scalesia Lodge Glamping Tent | Source: Scalesialodge.com

Scalesia Lodge Glamping Tent | Source: Scalesialodge.com

Scalesia Lodge Restaurant | Source: Scalesialodge.com
Price Comparison
Rooms for two people in USD
Villas & Boutique Hotels
| Hotel | Price |
|---|---|
| Casa Baronesa Waterfront (9.8) | 718$ |
| Sandy Feet House (9.9) | 375$ |
| Mi Playa Beach Front Isabela (9.1) | 360$ |
| Iguana Crossing Boutique (8.8) | 351$ |
Comfort & Standard Hotels
| Hotel | Price |
|---|---|
| Chez Manany Galapagos (9.5) | 209$ |
| The Wooden House Hotel (8.3) | 180$ |
| The Isabela Beach House (9.4) | 167$ |
| Isamar Hotel (9.0) | 161$ |
| Cormorant Beach House (9.4) | 159$ |
| Hotel Albemarle (8.3) | 152$ |
| La Casa de Marita (8.7) | 151$ |
Budget Hotels
| Hotel | Price |
|---|---|
| Apartahotel Casa Soleil (8.9) | 58$ |
| Hostal Punta Arena (8.9) | 45$ |
| El Rincon de George (8.5) | 35$ |
| Posada del Caminante (8.9) | 30$ |
The Best Hotels In Isabela Galapagos
Villas & Boutique Hotels
Casa Baronesa Waterfront Villa
(Seaside Villa)
Casa Baronesa is a waterfront villa in Puerto Villamil, a few steps from Puerto Villamil Beach, with a garden, free Wi-Fi, a shared kitchen and a balcony with sea views.
It has four air-conditioned bedrooms and a fully equipped kitchen. Amenities include a hot tub, a high chair, an indoor fireplace and an outdoor BBQ grill, and there are cycling routes nearby. At 718$ for two it is the most expensive stay in the Isabela list, with a 9.8 rating.
Book at Expedia Book at Booking.com
Sandy Feet House
(Seaside Villa)
Sandy Feet House is a beachfront villa in Puerto Villamil, steps from the beach. It has two bedrooms, two bathrooms, a fully equipped kitchen and a terrace with sea views, plus free Wi-Fi, air conditioning and a garden.
The master bedroom has a king bed and a private bathroom facing the ocean, and the second bedroom has two twin XL beds. The sofa in the living room can be used as two single beds. The kitchen has modern appliances and cookware, and there is a washer/dryer. At 375$ for two it has the highest rating in the Isabela list (9.9).
Mi Playa Beach Front Isabela
(Seaside Villa)
Mi Playa Beach Front has two private apartments, with two bedrooms, three bathrooms, a fully equipped kitchen and a large social area with beach amenities and lounges.
It is a few steps from Puerto Villamil Beach and has a private beach area, water sports facilities and a garden. Breakfast can be a buffet, continental or Full English/Irish, and bikes can be hired. At 360$ for two it is rated 9.1.
Book at Expedia Book at Booking.com
Iguana Crossing Boutique Hotel
(Boutique Hotel)
Iguana Crossing Boutique Hotel is in Puerto Villamil, across the street from the beach and close to the town center. It has 14 rooms, a pool and a rooftop lounge, and it uses materials from the island. The rooms are mostly white with dark furniture, and have flat-screen TVs, air conditioning, stocked minibars and plenty of storage.
The listing mentions iguanas crossing the road in front of the hotel. Most of the staff are locals and can help with excursions and massages. There is a restaurant, an ocean-view bar and an outdoor jacuzzi. At 351$ for two it is the cheapest of the four villas and boutique hotels here, with an 8.8 rating, the lowest of the four.
Comfort & Standard Hotels
Chez Manany Galapagos Ecolodge
Chez Manany is a family-owned eco-lodge outside Puerto Villamil. The listing says it is run by Manany, who works in tourism, and the architect Wilson. Sea lions and marine turtles can be seen snorkeling at the nearby Concha de Perla lagoon.
The lodge can recommend and arrange tours, including a honeymoon package, and families are welcome, with a special rate for children under 8. There are bicycles, a laundry service and a water purification system. The Romantic Suite and the Design Apartments each have a private terrace and a fully equipped kitchen. At 209$ for two it is the most expensive of the comfort and standard hotels here, rated 9.5, the highest in the group.
Book at Expedia Book at Booking.com
The Wooden House Hotel
The Wooden House Hotel is a family-run beach hotel on Isabela, a short walk from the beach, with an outdoor swimming pool and free Wi-Fi. It arranges diving and snorkeling trips, biking and kayaking.
Rooms are Deluxe Double, Single, Twin and King Rooms with wooden furnishings, air conditioning, work desks and showers, and some have wall drawings.
The restaurant serves local and international food, with outdoor seating by the pool, and an American breakfast is served daily. The hotel has solar water heaters and a farm that supplies seasonal produce. At 180$ for two it is rated 8.3, the lowest rating in the group, shared with Hotel Albemarle.
Book at Expedia Book at Booking.com
The Isabela Beach House
Isabela Beach House has six beachfront rooms and two garden-view rooms. Each has a private bathroom with a solar-heated shower, air conditioning and free Wi-Fi, and the house is smoke-free. Breakfast is served on the beach, with fruit, yogurt, granola, bread and coffee, and the staff help with reservations and recommendations.
It is a five-minute walk from the harbor and town center. The Isabela Discovery team helps plan day tours such as kayaking, hiking, snorkeling, fishing, scuba diving and bird-watching. At 167$ for two it is rated 9.4.
Isamar Hotel
Isamar Hotel is a 4-star hotel on the beach in Puerto Villamil, with 30 rooms in a Mediterranean-inspired design, beach access, a lounge and balcony areas.
It is close to downtown, most of the island’s attractions and restaurants. The deck has lounge and shaded areas with private access to the beach, and there is a community balcony with ocean views, a restaurant and bar, and another lounge outside the restaurant. At 161$ for two it is rated 9.0.
Book at Expedia Book at Booking.com
Cormorant Beach House
I stayed at Cormorant Beach House. It has 10 rooms on the Puerto Villamil coast, by a white sand beach.
Its listing describes a minimalist, ecological hotel that has been running for over 20 years. Breakfast is at a local-owned restaurant near the hotel, and the staff can help plan activities. At 159$ for two it is rated 9.4, the same as The Isabela Beach House, which costs 8$ more.
Book at Expedia Book at Booking.com
Hotel Albemarle
Hotel Albemarle is a Mediterranean-style house on Puerto Villamil beach, with an outdoor pool and a garden. The air-conditioned rooms have tiled floors, wooden-beamed ceilings and private marble bathrooms, with sea or pool views. The listing mentions palm trees along the waterfront and marine iguanas.
Rooms include doubles or twins with pool or sea views, triples with sea views and doubles with partial sea views, all with air conditioning, cable TV and Wi-Fi. There is a breakfast area, a pool area and a terrace. At 152$ for two it is rated 8.3, the lowest rating in the group, shared with The Wooden House.
Book at Expedia Book at Booking.com
La Casa de Marita
La Casa de Marita is a boutique hotel on the white-sand beaches of Puerto Villamil. The suites have contemporary art, private balconies with sea views, air conditioning, minibars and seating areas. The restaurant serves national and international dishes made with organic produce from Marita’s plantation.
There are hammocks facing the sea and a library, and snorkeling and hiking trips can be arranged. Room types are Beachfront Suites, Beachfront Jr. Suites, Garden Rooms with a view of an endemic garden, and Inland Rooms across from the main building. At 151$ for two it is the cheapest of the comfort and standard hotels here, rated 8.7.
Book at Expedia Book at Booking.com
Budget Hotels
Apartahotel Casa Soleil
Casa Soleil Aparthotel is in Puerto Villamil, about 450 meters from the beach. It has fully equipped one- and two-bedroom apartments, each with a kitchen, a living room, a patio and a terrace.
Options are the Deluxe Apartment, the Superior Apartment and a 2-Bedroom Apartment for up to 5 guests, all with a kitchen with a toaster, a dining area, a flat-screen TV and a private bathroom with free toiletries. At 58$ for two it is the most expensive of the budget hotels here, rated 8.9.
Book at Expedia Book at Booking.com
Hostal Punta Arena
Hostal Punta Arena is a guesthouse in Puerto Villamil, a 5-minute walk from the beach. It has a garden, a shared kitchen, room service, a tour booking service and free Wi-Fi. Rooms have closets and private bathrooms with toiletries, and some have garden views.
The on-site restaurant serves American food with vegan, dairy-free and gluten-free options. Snorkeling and cycling are close by, and the multilingual staff are available around the clock. At 45$ for two it is rated 8.9.
Book at Expedia Book at Booking.com
El Rincon de George
El Rincon de George is in Puerto Villamil, a 3-minute walk from the beach. Rooms are air-conditioned with free Wi-Fi and access to a terrace, and some have a kitchenette with a fridge.
Rooms range from the Budget Double Room to the Quadruple Room with a private bathroom. Free drinking water is provided and breakfast is available. At 35$ for two it is rated 8.5, the lowest rating among the budget hotels here.
Posada del Caminante
Posada del Caminante is a hostel a short walk from the beach, with rooms with refrigerators, TVs and private or shared bathrooms with 24-hour hot water. There is a shared kitchen, free fruit and a laundry service.
Rooms are doubles, triples and quadruples, plus a 4-bed mixed dormitory. The staff can arrange tours, and there is an outdoor area with hammocks. Free drinking water, bananas and oranges are included. At 30$ for two it is the cheapest hotel in the Isabela list, rated 8.9.
Book at Expedia Book at Booking.com
All the Articles about the Galapagos Islands
San Cristobal Island - The easternmost island of the Galápagos, the “Isla Bonita”
Santa Cruz Island - The island with the best tourism infrastructure.
Isabela Island - The most adventurous and less explored island of the main three.
All the Articles about Ecuador
Galapagos Islands - Volcanic islands and unique wildlife about 1,000 km off the Ecuadorian coast.
Amazon Rainforest - The Ecuadorian part of the world’s largest tropical rainforest.
The Andes - The Ecuadorian Andes, with volcanoes, ancient sites and wildlife.
Pacific Coast - Ecuador’s Pacific Coast, between the Andes and the Pacific Ocean.
Cloud Forest - Cloud forests, home to a large variety of plants and animals.
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