Galapagos Islands Transportation Guide
João Petersen · Last updated September 2, 2026

Transportation in the Galapagos is simple once you know how it works, but it is different from getting around on the mainland. Strict regulations, limited infrastructure and the geography of the islands mean that planning your Galapagos Islands transportation saves you time and money.
This guide covers the main ways to reach the Galapagos, travel between islands and move around locally, for cruise passengers and for travelers who stay on land.
Your Galapagos Islands Essentials - Quick Guide
Short on time? This quick Galapagos guide will help you plan.


Where to Stay:
- – Finch Bay Galapagos Hotel (Santa Cruz Island)
- – Golden Bay Galapagos Hotel (San Cristobal Island)
- – Hotel Iguana Crossing (Isabela Island)
Must-Do Experiences:
- – 360 Tour (San Cristobal highlights by boat)
- – Kicker Rock Tour (Full-day snorkeling tour to Kicker Rock)
- – Bartolome Island Tour (Iconic views and marine life)
- – Floreana Island Tour (Snorkel, fishing and history)
- – Sierra Negra Volcano Tour (Half-day guided hike on Isabela Island)
- – Los Tuneles Tour (Snorkeling tour on Isabela Island)
The links in this box are affiliate links.
Tours sell out fast. Book early and plan a backup day.
Getting to the Galapagos Islands
Reaching the Galapagos always involves a domestic flight from mainland Ecuador. No international flights go directly to the islands, and all passengers go through extra controls before departure.
Flights from Mainland Ecuador
Flights depart from Quito and Guayaquil, with several daily connections. Guayaquil is closer and often has slightly shorter flight times, and Quito is more convenient if you are already exploring mainland Ecuador.
I flew with both Avianca and LATAM, and I always landed in San Cristobal.
Before boarding, passengers go through document checks and luggage inspections, which are part of the islands’ biosecurity system.
Galapagos Airports
Two main airports connect the Galapagos with mainland Ecuador, and the one you arrive at affects your onward transportation.
- Baltra Airport (GPS): Main gateway for Santa Cruz Island and the primary entry point for flights from mainland Ecuador
- San Cristobal Airport (SCY): Direct access to San Cristobal Island, also with flights from mainland Ecuador
From Baltra Airport, travelers continue by bus, ferry and taxi to reach Puerto Ayora on Santa Cruz Island. I never landed at Baltra, but I flew out of it and did the same transfer in reverse. I do not remember the prices.
Isabela also has a small airport, but it is used only for inter-island flights, not for flights to or from the mainland.

Baltra Airport in the Galapagos

Moments after arriving by plane to San Cristobal Island
Galapagos Islands Transportation - Between Islands
Island hopping in the Galapagos is possible, but the options are limited and schedules can change with weather and sea conditions. Knowing how inter-island transport works is a key part of planning your Galapagos Islands transportation.
Inter-Island Flights
Small planes from Emetebe fly between some of the main islands. They are faster and more comfortable than ferries and more expensive, which suits travelers who are short on time or sensitive to rough seas. I have not flown with Emetebe myself.

An airplane from Emetebe, the Galapagos inter-island airline
Inter-Island Ferries
Ferries are the most common way to travel between islands such as Santa Cruz, Isabela and San Cristobal. They are affordable but can be bumpy in rough seas, and the crossing usually takes about two to three hours.
I took the ferry from San Cristobal to Santa Cruz, from Santa Cruz to Isabela, and back. I think each ride cost about $35, and I got a bit seasick once. You also pay a small water taxi to reach the ferry, which surprised me, but it is cheap.
The inter-island ferries were definitely the roughest leg of my trips, while the flights and the water taxis were fine. The water taxis were also my biggest cost surprise, because I did not know I had to pay for them.

Puerto Ayora’s dock in Santa Cruz island, Galapagos

An inter-island ferry between San Cristobal and Santa Cruz
Plan Your Galapagos Trip (Free Quote)
Want help organizing this trip? I recommend Happy Gringo, a travel agency in Ecuador. You can ask them for a free quote.
Get Free QuoteGalapagos Islands Transportation - On Each Island
Once you are on an island, getting around is fairly simple and depends on where you stay and what you have planned.
Taxis & Local Transport
Taxis in the Galapagos are mostly white pickup trucks and run on fixed routes, not meters. Prices are usually standard, but confirm before you get in. I think a ride in town cost me about $2.50.

A pickup van taxi outside of the San Cristobal airport
Car Rental
Car rental is essentially not an option in the Galapagos Islands. The import of vehicles is strictly regulated, and there are no traditional car rental agencies for visitors. You will see many vehicles on the islands, especially in Puerto Ayora, but most of them are taxis or are used for official and local purposes.
Walking & Biking
In Puerto Ayora and Puerto Baquerizo Moreno, many attractions, restaurants and beaches are within walking distance. On Isabela, biking is a popular and practical way to get around, because the terrain is flat and there is little traffic. I rented a bike on Isabela, and it cost between $15 and $30.

Biking to the Wall of Tears - The beach section of the route
Galapagos Islands Transportation - Tours & Excursions
Most visitors explore the islands through organized activities, which makes local transportation much simpler.
Day Tours & Boat Trips
Transportation is usually included in guided tours, whether it is a snorkeling trip, a wildlife excursion or a boat tour. Pickups are usually arranged from your hotel or a nearby meeting point.

The speedboat that takes you on the Los Tuneles tour
Organized Transfers
Many hotels and tour operators offer organized transfers between airports, ferry terminals and accommodation. They are especially helpful the first time you deal with Galapagos Islands transportation.

The boats parked next to the lava formations on the Los Tuneles tour
Galapagos Islands Transportation Tips
Transportation in the Galapagos runs on a flexible schedule, so a little patience helps.
- Book inter-island transport in advance
- Expect delays due to weather or sea conditions
- Travel light, especially for flights and ferries
- Carry cash for taxis and smaller transfers
Read More: These three articles might help you plan your Galapagos trip: Best Time to Visit the Galapagos Islands - Galapagos Packing List - Things To Know Before Visiting the Galapagos IslandsCruise vs Land-Based Galapagos Islands Transportation
Transportation depends on how you visit the islands.
- Cruise travelers have most transportation organized in advance
- Land-based travelers rely more on ferries, taxis, and local transfers
Both options work well. Knowing how Galapagos Islands transportation works helps you choose the travel style that suits you.
Read More: Check out our articles on how to choose your Galapagos Cruise and the Best Things To Do in the Galapagos Islands while on land.Where to Stay in the Galapagos Islands
You can stay on a cruise, which is also your hotel, or on land on Santa Cruz, San Cristobal or Isabela, in guesthouses or hotels.
I like staying on the islands and waking up to the sound of the waves, then walking to a nearby beach or town before a day tour. Book early, especially in high season.
Accommodation: Where to stay and the best hotels and hostels on the three main islands (Santa Cruz, San Cristobal, and Isabela)Plan your trip
The links in this box are affiliate links. You won't pay more, and they help keep the blog running. Each line says whether I have used the product.

Car Rental: Discovercars compares car rental offers from many companies.

Accommodation: Book your hotels with Booking.com or Expedia. I used Agoda in Southeast Asia.
Flights: Trip.com sells flights, hotels, train tickets, attractions and car rental. Airhelp handles compensation claims for delayed, canceled or overbooked flights and charges a 35% fee only if the claim succeeds.
Trains and Buses: I have booked with Omio several times, including from Lisbon to San Sebastian. 12Go sells tickets for trains, buses, ferries, transfers and flights across Asia and some other regions.

Tours and Tickets: I have used GetYourGuide on some trips. Viator sells tours, activities and tickets, and most have free cancellation up to 24 hours before.
Mobile eSIM: Holafly sells eSIM data plans for travel, delivered by email (5% discount). I have used Airalo, not in the Galapagos.
Travel Insurance: Heymondo sells travel insurance that covers medical issues, lost luggage, transport delays and trip cancellation, with an app that offers medical chat and 24/7 assistance. It is well reviewed, and this link gets you 5% off. Safetywing sells subscription health and travel insurance for people who travel or live abroad, covering medical treatment, emergency dental care and travel problems such as lost luggage and delays.






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